Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGGGGCCCCAGGAAGAGACTTGTCTA
((((((((..(((.((((((.&)))))))))..)))).........)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001276469
GeneSymbolB4GALNT1
Binding site1388,1417
Score0.923
Seed1
Au0.485
Energy-22.7
Binding len29
Me-7.093
Phylopstem0.6388291235294118
Phylopflank0.47467814250000007
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure