Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACTGCAGTTGTGAG
((((((((((((((((.....&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276469
GeneSymbolB4GALNT1
Binding site663,680
Score1.0
Seed1
Au0.353
Energy-23.6
Binding len17
Me-3.938
Phylopstem0.31734981250000005
Phylopflank1.0577243337500002
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure