Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGGCCGCGCTGGAGG
((.((((.((((((....(((&)))...)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276471
GeneSymbolCORO1C
Binding site1326,1346
Score0.846
Seed0
Au0.397
Energy-19.4
Binding len20
Me-8.777
Phylopstem-0.030606333333333333
Phylopflank0.23772579249999998
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure