Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTGCGGCCAAGCGCGCAGG
((((.(((..(((((((((((&))).)))))))).)))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276479
GeneSymbolLONP1
Binding site2516,2539
Score0.846
Seed0
Au0.368
Energy-20.2
Binding len23
Me-10.356
Phylopstem3.946666358333333
Phylopflank4.585584617499999
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure