Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGAAAGCTGCC
..((((((....(((((((((&)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276504
GeneSymbolSDHD
Binding site272,290
Score0.923
Seed1
Au0.5
Energy-21.5
Binding len18
Me-13.427
Phylopstem0.23094646666666663
Phylopflank4.1975643725
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure