Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTCCAGGTCTTTGTATGCCACTGAGGTC
(((((((((((((...((((((&.))))))))))))))))....))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001276718
GeneSymbolPAK6
Binding site2655,2686
Score0.846
Seed1
Au0.426
Energy-18.0
Binding len25
Me-5.763
Phylopstem3.230960352941177
Phylopflank5.204337335
Longest consecutive pairings16
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure