Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAAGGCTGCAGCGCC
..((.(((((((((....(((&)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276725
GeneSymbolIFTAP
Binding site175,194
Score0.846
Seed0
Au0.294
Energy-20.5
Binding len19
Me-10.045
Phylopstem-0.03807941111111109
Phylopflank0.10803166375000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure