Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGACCTGCCCTGTGCAGCTGTGGG
(((((((((((......((((&.))))......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001276761
GeneSymbolTP53
Binding site550,578
Score0.846
Seed1
Au0.338
Energy-20.9
Binding len23
Me-10.399
Phylopstem0.2699387090909091
Phylopflank0.12922965549999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure