Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCTACAACCCCTCAAAATGAAGAAATCCGAGCAGTTGGCAGA
(((((((((((((((((((((&))))..))))))).....................))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277061
GeneSymbolMFF
Binding site830,876
Score0.846
Seed1
Au0.574
Energy-20.9
Binding len46
Me-3.938
Phylopstem0.5149169866666667
Phylopflank0.10855874124999998
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure