Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACAGCTGCAGCC
.....(((((((((((..(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277075
GeneSymbolZNF541
Binding site3024,3041
Score0.923
Seed0
Au0.368
Energy-21.9
Binding len17
Me-13.666
Phylopstem0.8420309636363636
Phylopflank-0.18068865849999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure