Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTACAACGAGCTGCGT
.(((((((.(.((((((((((&))))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277083
GeneSymbolPOTEJ
Binding site2346,2367
Score0.846
Seed1
Au0.382
Energy-19.7
Binding len21
Me-7.674
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure