Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCTGAATGGCTA
....((((.((((((((((((&))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277090
GeneSymbolZNF550
Binding site3802,3822
Score1.0
Seed0
Au0.559
Energy-21.0
Binding len20
Me-10.603
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure