Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCTGAATGGCTA
....((((.((((((((((((&))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277091
GeneSymbolZNF550
Binding site3216,3236
Score0.846
Seed0
Au0.559
Energy-21.0
Binding len20
Me-10.603
Phylopstem-0.43838183333333336
Phylopflank-0.4617934149999998
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure