Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGATGCAGCTCAGA
(((.(((((((.(((.(((((&)))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277092
GeneSymbolZNF550
Binding site1231,1251
Score0.923
Seed0
Au0.485
Energy-19.7
Binding len20
Me-10.549
Phylopstem-0.13581042857142858
Phylopflank-0.27367023100000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure