Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTAAAGCAACTTCAGCTGGAAA
((.((((((.((((((.((((&))))...)))))).)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277140
GeneSymbolACTR3
Binding site3643,3667
Score1.0
Seed0
Au0.632
Energy-19.6
Binding len24
Me-6.738
Phylopstem-0.29549333333333333
Phylopflank0.03688610637500002
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure