Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTCTTGCCTTAGCTGCAT
.((((((((.(((.....(((&)))......))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277140
GeneSymbolACTR3
Binding site569,591
Score0.821
Seed1
Au0.5
Energy-18.3
Binding len22
Me-6.861
Phylopstem5.736476124999999
Phylopflank5.675174126249999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure