Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGCTGCACCTCTGGCTGCGGCTGCGC
.((((((((((((((..((((&.)))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277155
GeneSymbolB3GALNT2
Binding site242,272
Score1.0
Seed1
Au0.162
Energy-25.3
Binding len21
Me-4.026
Phylopstem0.13270992857142852
Phylopflank-0.06056478749999998
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure