Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTTTCAACCGAGAAGATGCAGTGGCTGCC
..(((((((((((((.(((((&)))))..)))))...........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277171
GeneSymbolRBM46
Binding site1005,1037
Score0.846
Seed1
Au0.603
Energy-18.6
Binding len32
Me-5.19
Phylopstem3.287345266666667
Phylopflank4.272343125000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure