Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTTTCAACCGAGAAGATGCAGTGGCTGCC
..(((((((((((((.(((((&)))))..)))))...........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277173
GeneSymbolRBM46
Binding site1008,1040
Score0.846
Seed1
Au0.603
Energy-18.6
Binding len32
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure