Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGCAGGTCCCCTCAGCTGCC
..(((((((.((((((.((((&)))).))))....)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277200
GeneSymbolCNIH4
Binding site524,548
Score0.846
Seed1
Au0.456
Energy-21.8
Binding len24
Me-6.2
Phylopstem-0.0542499142857143
Phylopflank0.0037396350000000154
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure