Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTAACCTCGGCTGA
...((((((.(((((...(((&))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277200
GeneSymbolCNIH4
Binding site462,479
Score0.923
Seed0
Au0.5
Energy-17.7
Binding len17
Me-7.99
Phylopstem0.46817726666666665
Phylopflank1.1887946799999993
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure