Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTTTGTATTGTTCAGA
..(((((((((((.(((((...&))))).)))))).)).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330689
GeneSymbolPIP5K1A
Binding site3678,3698
Score0.846
Seed1
Au0.735
Energy-15.0
Binding len20
Me-5.814
Phylopstem2.950715738461539
Phylopflank1.4185002225000005
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure