Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGGCAGCTGCTGCCCCAGCCACAGCTGCAC
.((((((((.(((((...(((&.))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277224
GeneSymbolTAGLN2
Binding site1393,1428
Score0.846
Seed1
Au0.353
Energy-25.5
Binding len20
Me-5.269
Phylopstem0.380002325
Phylopflank-0.2214373125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure