Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCGGCTCGGTGTGCTCCTGTCCTTGCCTGTGCTGCTGCAGCTGGCGAC
(((((((((((((.(((((((&.)))).))).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277226
GeneSymbolLGR5
Binding site289,342
Score1.0
Seed1
Au0.338
Energy-26.5
Binding len25
Me-4.794
Phylopstem0.7274370714285714
Phylopflank0.51268255
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure