Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTAGTGTCAGGC
.((((((((...((((((....&)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001277285
GeneSymbolIGSF9B
Binding site11838,11854
Score0.846
Seed1
Au0.5
Energy-17.8
Binding len16
Me-11.207
Phylopstem0.29767750000000004
Phylopflank0.22119508750000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure