Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAGCAGGCAGAGATGTCAGAGATCACCCTGCAGCCGCCGGCTGCAGT
(((((((((((((((((.(((&.))).))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277285
GeneSymbolIGSF9B
Binding site3897,3948
Score0.846
Seed1
Au0.426
Energy-31.3
Binding len24
Me-3.938
Phylopstem0.4061523833333332
Phylopflank0.5186382774999999
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure