Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATGCAACCTCTGGTAAGCCAAGGGCAGCTGCGAC
(((((((((((((((((((((&)))).)))))))...............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277285
GeneSymbolIGSF9B
Binding site3585,3623
Score1.0
Seed1
Au0.441
Energy-28.0
Binding len38
Me-3.938
Phylopstem0.12533104324324323
Phylopflank0.09480364500000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure