Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCCTCAGCAAGCGT
.(((.((((.(((((((((((&))))))))))).))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277285
GeneSymbolIGSF9B
Binding site13180,13202
Score0.923
Seed0
Au0.426
Energy-26.4
Binding len22
Me-9.155
Phylopstem2.799383818181818
Phylopflank3.5339373937499996
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure