Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGTGACTCCCTGCAGCTGGGAA
((.((((((((((((.((((.&))))))).......))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277314
GeneSymbolFMN1
Binding site2678,2705
Score0.923
Seed0
Au0.485
Energy-20.7
Binding len27
Me-5.728
Phylopstem0.21978005789473687
Phylopflank0.023259217500000047
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure