Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAGGCAGCAGCTCAGA
(((.(((((((.((.(((((.&))))).)).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277372
GeneSymbolKIAA2012
Binding site2294,2315
Score0.846
Seed0
Au0.471
Energy-19.8
Binding len21
Me-11.052
Phylopstem1.859721
Phylopflank1.6843406112500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure