Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCGGACAACTGTGTCTTCTCAGTGGAGTTGCAGCTGCCTCCCAAGGCTGCAGC
((((((((((((((((((...&.)))))))))).......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277731
GeneSymbolAOC3
Binding site414,471
Score0.846
Seed1
Au0.338
Energy-23.4
Binding len27
Me-3.938
Phylopstem0.974464064
Phylopflank2.276735775
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure