Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGAGCACCAGCTGCAGAGGCTGCAGG
(((((((((((((((......&.))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277732
GeneSymbolAOC3
Binding site152,182
Score0.885
Seed1
Au0.338
Energy-21.4
Binding len20
Me-4.171
Phylopstem0.5867763888888891
Phylopflank1.2566658275
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end2
PositionCDS
2D Structure