Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCTACTGCTGAGCTGTG
..(((((((((((...(((((&)))))...)))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277764
GeneSymbolCIB1
Binding site790,812
Score0.923
Seed1
Au0.426
Energy-20.0
Binding len22
Me-6.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure