Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGTAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277783
GeneSymbolATG12
Binding site2080,2106
Score0.846
Seed0
Au0.426
Energy-20.1
Binding len26
Me-5.728
Phylopstem0.8589320505555554
Phylopflank0.21511214437499998
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure