Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCACAGGCCCAGCCTCACCAAGTGCAGCCTCAACAGCAGCAGCTGCAGA
((((((((((.(((((.((((&.))))..))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277813
GeneSymbolYTHDF3
Binding site1401,1457
Score0.846
Seed1
Au0.412
Energy-28.4
Binding len24
Me-6.762
Phylopstem5.0083869
Phylopflank4.510398499999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure