Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCCAGCTGTAAA
(((((((((.((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277842
GeneSymbolCCNT1
Binding site1745,1761
Score1.0
Seed1
Au0.529
Energy-22.8
Binding len16
Me-5.18
Phylopstem0.7491918888888889
Phylopflank1.1483326950000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure