Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCAAGCGTTGGCTGTC
..(((((((((.((((..(((&)))..)))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277842
GeneSymbolCCNT1
Binding site854,875
Score0.846
Seed1
Au0.485
Energy-19.8
Binding len21
Me-8.304
Phylopstem0.8700957600000001
Phylopflank0.6552782612500001
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure