Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCAGCTGTTGGGCTGCT
..(((((((((((((...(((&)))..)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277971
GeneSymbolPOMK
Binding site212,233
Score0.808
Seed1
Au0.353
Energy-21.4
Binding len21
Me-5.19
Phylopstem-0.10516197333333324
Phylopflank1.2114080275
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure