Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCAACCTCGCTGGAC
.(.((((.(.(((((((((((&))))))))))).))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001277990
GeneSymbolCXCL12
Binding site2857,2877
Score1.0
Seed0
Au0.588
Energy-18.6
Binding len20
Me-8.907
Phylopstem0.26685109090909087
Phylopflank0.4018257025
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure