Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCGGCACAGGGTCTGCT
..(((((((((((((((((((&))))))))))))...)))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278054
GeneSymbolCASP9
Binding site912,938
Score1.0
Seed1
Au0.441
Energy-22.2
Binding len26
Me-4.957
Phylopstem-0.22648897199999996
Phylopflank0.15627230124999997
Longest consecutive pairings12
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure