Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTTGCTGAAGCACCCCCGGACTGCAGTGTGAACGTGCTGTGCAAT
(((((((((((((((((((((&))))))).................)))))))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278054
GeneSymbolCASP9
Binding site1854,1905
Score0.923
Seed1
Au0.397
Energy-21.3
Binding len51
Me-3.938
Phylopstem0.6674603599999999
Phylopflank1.0625229087499999
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure