Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATCCAGCAGCTGCT
..((((((((((.(((.....&))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278074
GeneSymbolCOL5A1
Binding site1041,1057
Score0.846
Seed1
Au0.426
Energy-21.3
Binding len16
Me-6.246
Phylopstem5.6861179090909095
Phylopflank4.6084976525000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure