Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGACCGCAGCG
.....((((((((((..(((.&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278074
GeneSymbolCOL5A1
Binding site952,966
Score0.923
Seed0
Au0.5
Energy-21.6
Binding len14
Me-13.899
Phylopstem3.5787343999999996
Phylopflank4.106340608750001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure