Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAGAAGAGAGCGGAATCGGCAGGCTGCAGCTGCC
..((((((((((((((..(((&.))).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278098
GeneSymbolGDNF
Binding site286,322
Score1.0
Seed1
Au0.441
Energy-23.5
Binding len21
Me-4.957
Phylopstem0.15761191733333335
Phylopflank0.18943753500000016
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure