Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCAGCCCAGCTGCT
..(((((((.(((((......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278119
GeneSymbolZKSCAN8
Binding site2849,2865
Score1.0
Seed1
Au0.544
Energy-21.0
Binding len14
Me-6.433
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure