Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAGCAGCCGCCAGCTGGGAG
((.(((((((((((((..(((&)))..)))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278138
GeneSymbolENG
Binding site2135,2158
Score0.923
Seed0
Au0.338
Energy-26.4
Binding len23
Me-5.495
Phylopstem0.41275535714285716
Phylopflank0.5669324467499999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure