Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCAGCACATGCCGGGA
.((((((((....((((.(...&).))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278141
GeneSymbolNBPF12
Binding site6023,6042
Score0.846
Seed1
Au0.515
Energy-17.4
Binding len19
Me-12.497
Phylopstem-0.17856124999999995
Phylopflank-0.09335931599999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure