Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCGGGGACCTGCCACGGCCGCGGCTTAACACCAGCGAC
((((((((((((((((.((((&.))))...))))))))))))........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278160
GeneSymbolAKT1S1
Binding site897,938
Score1.0
Seed1
Au0.426
Energy-25.3
Binding len33
Me-3.938
Phylopstem3.7628110416666662
Phylopflank1.4995538975
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure