Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCTCTTAAATGTTGTTCTAATAATCTCAGCTGCAT
.((((((((.((((((.(((.&.))).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001278162
GeneSymbolHIPK3
Binding site4474,4514
Score0.872
Seed1
Au0.632
Energy-21.5
Binding len21
Me-5.036
Phylopstem5.572430000000001
Phylopflank5.410072749999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure