Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGACCTGTGTGGCAGGA
.((((.((((((...(((....&)))...)))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001278168
GeneSymbolCDK5RAP1
Binding site1442,1460
Score0.846
Seed0
Au0.485
Energy-17.2
Binding len18
Me-8.576
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure